Shikimate pathway Shikimic acid
1 shikimate pathway
1.1 biosynthesis of aromatic amino acids
1.2 starting point in biosynthesis of phenolics
1.3 other compounds
1.3.1 mycosporine-like amino acids
shikimate pathway
biosynthesis of aromatic amino acids
the shikimate pathway 7 step metabolic route used bacteria, fungi, algae, parasites, , plants biosynthesis of aromatic amino acids (phenylalanine, tyrosine, , tryptophan). pathway not found in animals; therefore, phenylalanine , tryptophan represent essential amino acids must obtained animal s diet (animals can synthesise tyrosine phenylalanine, , therefore not essential amino acid except individuals unable hydroxylate phenylalanine tyrosine).
the 7 enzymes involved in shikimate pathway dahp synthase, 3-dehydroquinate synthase, 3-dehydroquinate dehydratase, shikimate dehydrogenase, shikimate kinase, epsp synthase, , chorismate synthase. pathway starts 2 substrates, phosphoenol pyruvate , erythrose-4-phosphate , ends chorismate, substrate 3 aromatic amino acids. fifth enzyme involved shikimate kinase, enzyme catalyzes atp-dependent phosphorylation of shikimate form shikimate 3-phosphate (shown in figure below). shikimate 3-phosphate coupled phosphoenol pyruvate give 5-enolpyruvylshikimate-3-phosphate via enzyme 5-enolpyruvylshikimate-3-phosphate (epsp) synthase.
then 5-enolpyruvylshikimate-3-phosphate transformed chorismate chorismate synthase.
prephenic acid synthesized claisen rearrangement of chorismate chorismate mutase.
prephenate oxidatively decarboxylated retention of hydroxyl group give p-hydroxyphenylpyruvate, transaminated using glutamate nitrogen source give tyrosine , α-ketoglutarate.
starting point in biosynthesis of phenolics
phenylalanine , tyrosine precursors used in phenylpropanoids biosynthesis. phenylpropanoids used produce flavonoids, coumarins, tannins , lignin. first enzyme involved phenylalanine ammonia-lyase (pal) converts l-phenylalanine trans-cinnamic acid , ammonia.
gallic acid biosynthesis
gallic acid formed 3-dehydroshikimate action of enzyme shikimate dehydrogenase produce 3,5-didehydroshikimate. latter compound spontaneously rearranges gallic acid.
other compounds
shikimic acid precursor for:
indole, indole derivatives , aromatic amino acid tryptophan , tryptophan derivatives such psychedelic compound dimethyltryptamine
many alkaloids , other aromatic metabolites
mycosporine-like amino acids
mycosporine-like amino acids small secondary metabolites produced organisms live in environments high volumes of sunlight, marine environments.
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